Research & Technology
Attacking cystic fibrosis at its roots
EAST LANSING, Mich., Nov. 19, 2019 – Breakthroughs in cystic fibrosis are finally happening. While the latest CF headlines tout a new genetic treatment that targets its underlying cause, a major challenge still remains: How will we get rid of the chronic lung infections that plague CF patients? A Michigan State University scientist is trying to understand how these complex infections cause such a terrible disease.
Through a $2.7 million National Institutes of Health grant, MSU and Spectrum Health are examining the ubiquitous anaerobic bacteria found in all CF patients, which are often dismissed as a non-factor by scientists.
“While the newly approved Trikafta medication isn’t a cure, it certainly has demonstrated positive health benefits for those suffering from the disease; even patients on Trikafta will still battle chronic lung infections,” said Robert Quinn, MSU assistant professor of biochemistry and molecular biology, who’s leading the grant. “We must use a dual approach of treating the underlying cause and targeting lung infections if we want to ever eliminate the disease.”
Cystic fibrosis is a progressive, life-threatening disease that causes thick mucus to build up primarily in the lungs as well as other parts of the body. Doctors treat the chronic lung infection with increasingly aggressive antibiotics. While many scientists don’t understand the effects of antibiotic treatment against CF infections, this is the traditional approach to most, if not all, patients.
Quinn’s team is focusing on the bacteria that thrive in the lungs as thickening mucus cuts off their oxygen supply. Counterintuitive as it may seem in the lung, these anaerobic bacteria live without oxygen and are frequently present in CF-infected lungs, but little is known about their role as pathogens or contributors to CF.
Quinn’s team is focusing on pulmonary exacerbations, the flare ups that prompt hospital stays involving an increase in symptom severity, loss of lung capacity and an aggressive antibiotic treatment. During these flare ups, a turnover in the bacteria populations takes place; the anaerobic bacteria shift gears to thrive and dominate.
“Many doctors treating patients aren’t aware of these anaerobes,” Quinn said. “There’s still plenty of guesswork in treating CF. Antibiotics are prescribed, flare ups temporarily subside and the patient gets to leave the hospital; but sometimes they don’t improve and doctors don’t understand why.
“We believe that physicians have not been treating the principal cause of the flare ups – the anaerobes,” Quinn said.
By partnering with Spectrum Health, the scientists will be able to collect many samples from patients suffering from cystic fibrosis and study the microbial dynamics that drive the disease. They’ll also use a new model developed at MSU that mimics a CF-infected lung so they can test their hypothesis in a more realistic environment.
In addition, the team will utilize cutting-edge multi-omics methods, including microbiome sequencing, metabolomics and novel bioinformatics data analysis platforms, essentially taking a big-data approach to reveal clues toward a cure, Quinn said.
“Our scientific rationale is that a better understanding of what causes microbial changes during these flare ups will lead to more efficacious and targeted therapy against pathogens,” he said.
Michigan State University has been working to advance the common good in uncommon ways for 160 years. One of the top research universities in the world, MSU focuses its vast resources on creating solutions to some of the world’s most pressing challenges, while providing life-changing opportunities to a diverse and inclusive academic community through more than 200 programs of study in 17 degree-granting colleges.
Spectrum Health, a not-for-profit, integrated health system, is committed to improving the health and wellness of our communities. We live our mission every day with 31,000 compassionate professionals, 4,300 medical staff experts, 3,300 committed volunteers and a health plan serving 1 million members. Our talented physicians and caregivers are privileged to offer a full continuum of care and wellness services to our communities through 14 hospitals, including Helen DeVos Children’s Hospital, 155 ambulatory sites and telehealth offerings. We pursue health care solutions for today and tomorrow that diversify our offerings. Locally-governed and based in Grand Rapids, Michigan, our health system provided $585 million in community benefit in fiscal year 2019. Thanks to the generosity of our communities, we received $30 million in philanthropy in the most recent fiscal year to support research, academics, innovation and clinical care. Spectrum Health has been recognized as one of the nation’s 15 Top Health Systems by Truven Health Analytics®, part of IBM Watson HealthTM.